STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbru_1952Putative N-acetylneuramic acid synthetase (NeuB). (356 aa)    
Predicted Functional Partners:
Lbru_1954
Putative polysaccharide biosynthesis protein.
 
 
 0.995
Lbru_1956
Putative glycosyltransferase.
 
  
 0.977
capD1
Polysaccharide biosynthesis protein CapD.
 
 
 0.958
Lbru_1953
N-Acyltransferase (NAT).
 
 
 0.951
Lbru_1957
AHBA synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.939
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.924
Lbru_1429
Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
 0.791
Lbru_1959
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
    
  0.791
Lbru_1955
3-oxoacyl-ACP reductase.
  
    0.776
epsL
Putative sugar transferase EpsL.
  
  
 0.708
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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