Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lbru_1998Soluble lytic murein transglycosylase. (594 aa)    
Predicted Functional Partners:
Lbru_1997
D-ribulose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.844
Lbru_1996
Opacity protein-like surface antigen.
       0.743
Lbru_1995
Opacity protein-like surface antigen.
       0.732
Lbru_1994
Opacity protein-like surface antigen.
 
     0.718
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.532
amiB
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.525
Lbru_0848
Protein IcmE (DotG).
 
   
 0.475
Lbru_1277
Cysteine protease.
  
     0.441
mltG
Periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
   
 0.441
dotA
Defect in organelle trafficking protein DotA.
  
     0.434
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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