Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lbru_2010Hypothetical protein. (237 aa)    
Predicted Functional Partners:
ugpB
Glycerol-3-phosphate binding periplasmic protein.
       0.870
ugpQ
Glycerophosphoryl diester esterase.
       0.870
Lbru_2011
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.678
Lbru_2012
SAM-dependent O-methyltransferase.
       0.631
lly
4-hydroxyphenylpyruvate dioxygenase.
       0.603
Lbru_2014
Fumarylacetoacetate hydrolase.
       0.558
Lbru_2015
Glutathione S-transferase (maleylacetoacetate isomerase).
       0.558
Lbru_2007
Hypothetical protein.
       0.523
Lbru_2351
Putative lipase.
       0.445
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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