STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (355 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.996
Lbru_1973
Acetyl/propionyl-CoA carboxylase, beta subunit.
 
 
 0.938
Lbru_2015
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.930
Lbru_2014
Fumarylacetoacetate hydrolase.
 
  
 0.926
Lbru_0009
Phenylalanine-4-hydroxylase.
 
  
 0.923
Lbru_1742
HAD-superfamily phosphatase.
  
 
 0.836
phs
Pterin 4 alpha carbinolamine dehydratase.
  
  
 0.834
Lbru_2011
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
  
 0.792
Lbru_2418
Oxaloacetate decarboxylase subunit alpha.
  
 
 0.728
Lbru_1462
Polyketide synthase.
    
 0.723
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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