STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbru_2017PhnB protein. (142 aa)    
Predicted Functional Partners:
Lbru_2016
DNA binding protein.
 
  
 0.942
Lbru_2018
Hypothetical protein.
 
    0.862
Lbru_3218
Oxidoreductase,aldo/keto reductase family.
  
 
  0.589
Lbru_1579
Glyoxalase-like domain protein.
 
     0.561
Lbru_2019
Hypothetical protein.
       0.493
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.478
Lbru_2653
Sulfurylase ThiF.
  
 
  0.438
Lbru_1599
Chromate transporter.
 
  
  0.405
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.