Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lbru_0576 | Lbru_1624 | Lbru_0576 | Lbru_1624 | Phosphoesterase. | Hypothetical protein. | 0.581 |
Lbru_0576 | Lbru_2496 | Lbru_0576 | Lbru_2496 | Phosphoesterase. | Hypothetical protein. | 0.416 |
Lbru_0576 | Lbru_2497 | Lbru_0576 | Lbru_2497 | Phosphoesterase. | Cytokinin oxidase. | 0.689 |
Lbru_0576 | Lbru_2557 | Lbru_0576 | Lbru_2557 | Phosphoesterase. | AAA domain (dynein-related subfamily). | 0.771 |
Lbru_0576 | Lbru_3024 | Lbru_0576 | Lbru_3024 | Phosphoesterase. | Ankyrin repeat protein. | 0.771 |
Lbru_1601 | Lbru_2496 | Lbru_1601 | Lbru_2496 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.403 |
Lbru_1624 | Lbru_0576 | Lbru_1624 | Lbru_0576 | Hypothetical protein. | Phosphoesterase. | 0.581 |
Lbru_1624 | Lbru_2496 | Lbru_1624 | Lbru_2496 | Hypothetical protein. | Hypothetical protein. | 0.712 |
Lbru_1624 | Lbru_2497 | Lbru_1624 | Lbru_2497 | Hypothetical protein. | Cytokinin oxidase. | 0.682 |
Lbru_1624 | Lbru_2557 | Lbru_1624 | Lbru_2557 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.705 |
Lbru_1624 | Lbru_2875 | Lbru_1624 | Lbru_2875 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.630 |
Lbru_1624 | Lbru_3024 | Lbru_1624 | Lbru_3024 | Hypothetical protein. | Ankyrin repeat protein. | 0.670 |
Lbru_1624 | hpcD | Lbru_1624 | Lbru_2042 | Hypothetical protein. | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase. | 0.445 |
Lbru_2496 | Lbru_0576 | Lbru_2496 | Lbru_0576 | Hypothetical protein. | Phosphoesterase. | 0.416 |
Lbru_2496 | Lbru_1601 | Lbru_2496 | Lbru_1601 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.403 |
Lbru_2496 | Lbru_1624 | Lbru_2496 | Lbru_1624 | Hypothetical protein. | Hypothetical protein. | 0.712 |
Lbru_2496 | Lbru_2497 | Lbru_2496 | Lbru_2497 | Hypothetical protein. | Cytokinin oxidase. | 0.545 |
Lbru_2496 | Lbru_2557 | Lbru_2496 | Lbru_2557 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.654 |
Lbru_2496 | Lbru_2875 | Lbru_2496 | Lbru_2875 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.612 |
Lbru_2496 | Lbru_3024 | Lbru_2496 | Lbru_3024 | Hypothetical protein. | Ankyrin repeat protein. | 0.636 |
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