Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lbru_0513 | Lbru_1276 | Lbru_0513 | Lbru_1276 | 2-acylglycerophosphoethanolamine acyltransferase. | Acetyltransferase. | 0.986 |
Lbru_0513 | Lbru_1462 | Lbru_0513 | Lbru_1462 | 2-acylglycerophosphoethanolamine acyltransferase. | Polyketide synthase. | 0.994 |
Lbru_0513 | Lbru_2531 | Lbru_0513 | Lbru_2531 | 2-acylglycerophosphoethanolamine acyltransferase. | Transporter of the major facilitator superfamily (MFS). | 0.496 |
Lbru_0513 | pheA | Lbru_0513 | Lbru_2151 | 2-acylglycerophosphoethanolamine acyltransferase. | P-protein. | 0.527 |
Lbru_0513 | trpE | Lbru_0513 | Lbru_0441 | 2-acylglycerophosphoethanolamine acyltransferase. | Anthranilate synthase. | 0.525 |
Lbru_1177 | Lbru_2531 | Lbru_1177 | Lbru_2531 | HTH-type transcriptional regulator. | Transporter of the major facilitator superfamily (MFS). | 0.519 |
Lbru_1276 | Lbru_0513 | Lbru_1276 | Lbru_0513 | Acetyltransferase. | 2-acylglycerophosphoethanolamine acyltransferase. | 0.986 |
Lbru_1276 | Lbru_1462 | Lbru_1276 | Lbru_1462 | Acetyltransferase. | Polyketide synthase. | 0.999 |
Lbru_1276 | Lbru_2531 | Lbru_1276 | Lbru_2531 | Acetyltransferase. | Transporter of the major facilitator superfamily (MFS). | 0.683 |
Lbru_1276 | pheA | Lbru_1276 | Lbru_2151 | Acetyltransferase. | P-protein. | 0.598 |
Lbru_1276 | trpE | Lbru_1276 | Lbru_0441 | Acetyltransferase. | Anthranilate synthase. | 0.679 |
Lbru_1462 | Lbru_0513 | Lbru_1462 | Lbru_0513 | Polyketide synthase. | 2-acylglycerophosphoethanolamine acyltransferase. | 0.994 |
Lbru_1462 | Lbru_1276 | Lbru_1462 | Lbru_1276 | Polyketide synthase. | Acetyltransferase. | 0.999 |
Lbru_1462 | Lbru_2531 | Lbru_1462 | Lbru_2531 | Polyketide synthase. | Transporter of the major facilitator superfamily (MFS). | 0.482 |
Lbru_1462 | Lbru_2532 | Lbru_1462 | Lbru_2532 | Polyketide synthase. | Glyoxalase-like domain protein. | 0.402 |
Lbru_1462 | pheA | Lbru_1462 | Lbru_2151 | Polyketide synthase. | P-protein. | 0.445 |
Lbru_1462 | trpE | Lbru_1462 | Lbru_0441 | Polyketide synthase. | Anthranilate synthase. | 0.761 |
Lbru_2530 | Lbru_2531 | Lbru_2530 | Lbru_2531 | POT family transporter protein proton/peptide symporter. | Transporter of the major facilitator superfamily (MFS). | 0.565 |
Lbru_2531 | Lbru_0513 | Lbru_2531 | Lbru_0513 | Transporter of the major facilitator superfamily (MFS). | 2-acylglycerophosphoethanolamine acyltransferase. | 0.496 |
Lbru_2531 | Lbru_1177 | Lbru_2531 | Lbru_1177 | Transporter of the major facilitator superfamily (MFS). | HTH-type transcriptional regulator. | 0.519 |
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