STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbru_3208Patatin-like phospholipase. (405 aa)    
Predicted Functional Partners:
adc
Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
 
     0.675
Lbru_2936
Virulence protein.
    
   0.644
Lbru_2166
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.617
Lbru_1276
Acetyltransferase.
    
  0.589
Lbru_0513
2-acylglycerophosphoethanolamine acyltransferase.
    
  0.550
Lbru_1805
Alpha/beta hydrolase family protein.
  
     0.549
Lbru_3209
Cupin domain protein.
       0.479
Lbru_0857
Protein IcmS.
    
   0.454
icmW
Intracellular multiplication protein IcmW.
    
   0.454
Lbru_0511
Poly(3-hydroxybutyrate) depolymerase.
  
     0.402
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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