Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
APR68978.1DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)    
Predicted Functional Partners:
APR71856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.
       0.709
APR71015.1
EcsC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.622
APR70798.1
BON domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.617
APR68977.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.552
APR68976.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.430
Your Current Organism:
Acinetobacter haemolyticus
NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60
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