STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR69939.1DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (836 aa)    
Predicted Functional Partners:
APR69940.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.798
APR71606.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
APR69938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.608
APR71643.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
APR71607.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
APR71644.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AHTJS_05695
Replication protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.564
APR71910.1
DNA invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.557
AHTJS_07770
DDE transposase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.405
Your Current Organism:
Acinetobacter haemolyticus
NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.