APR70347.1 protein (Acinetobacter haemolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

APR70347.1

Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology. (734 aa)

Predicted Functional Partners:

APR69543.1

0.474

APR69765.1

0.474

APR70129.1

0.474

nfsB

0.474

APR69723.1

0.460

APR69724.1

0.460

yadH

0.460

APR71946.1

0.408

folE2

0.405

APR71947.1

0.404

Your Current Organism:

Acinetobacter haemolyticus

NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APR69543.1	APR69723.1	AHTJS_03495	AHTJS_04495	Nitrobenzoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
APR69543.1	APR70347.1	AHTJS_03495	AHTJS_08105	Nitrobenzoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR69723.1	APR69543.1	AHTJS_04495	AHTJS_03495	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrobenzoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
APR69723.1	APR69724.1	AHTJS_04495	AHTJS_04500	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
APR69723.1	APR70347.1	AHTJS_04495	AHTJS_08105	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
APR69724.1	APR69723.1	AHTJS_04500	AHTJS_04495	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
APR69724.1	APR70347.1	AHTJS_04500	AHTJS_08105	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
APR69765.1	APR70347.1	AHTJS_04725	AHTJS_08105	Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70129.1	APR70347.1	AHTJS_06895	AHTJS_08105	Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70347.1	APR69543.1	AHTJS_08105	AHTJS_03495	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrobenzoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70347.1	APR69723.1	AHTJS_08105	AHTJS_04495	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
APR70347.1	APR69724.1	AHTJS_08105	AHTJS_04500	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
APR70347.1	APR69765.1	AHTJS_08105	AHTJS_04725	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70347.1	APR70129.1	AHTJS_08105	AHTJS_06895	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70347.1	APR71946.1	AHTJS_08105	AHTJS_09425	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APR70347.1	APR71947.1	AHTJS_08105	AHTJS_09455	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
APR70347.1	folE2	AHTJS_08105	AHTJS_06145	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.	0.405
APR70347.1	nfsB	AHTJS_08105	AHTJS_09700	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APR70347.1	yadH	AHTJS_08105	AHTJS_09535	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
APR71946.1	APR70347.1	AHTJS_09425	AHTJS_08105	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Textmining

Fusion

Experiments

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About