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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR70447.1Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)    
Predicted Functional Partners:
APR70446.1
Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.967
APR70445.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.932
APR70449.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
APR70448.1
Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.877
APR69213.1
Type 4 pili biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.689
APR70795.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
APR70441.1
MxaD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.653
APR71548.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.628
APR71937.1
TatD family deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
APR69215.1
Pilus assembly protein PilY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.620
Your Current Organism:
Acinetobacter haemolyticus
NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60
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