STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR71371.1Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
AHTJS_08725
Lipid A export permease/ATP-binding protein MsbA; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.901
APR71372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.720
tolQ_2
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.707
APR71373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.661
APR71032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.642
APR71370.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.624
APR69467.1
Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.618
exbD_1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.603
ubiC
Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
  
     0.598
APR70450.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
Your Current Organism:
Acinetobacter haemolyticus
NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60
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