STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR71742.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (375 aa)    
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation.
 
 
 0.942
APR71956.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 
0.910
APR71741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.883
dadA
D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids.
  
  
 0.863
APR70503.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.813
APR69953.1
Aliphatic nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.802
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.783
APR71740.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.705
APR70212.1
D-amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.545
thiO
Glycine oxidase ThiO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.545
Your Current Organism:
Acinetobacter haemolyticus
NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60
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