STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycFCpxR; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
barA
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
phoR
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
envZ_1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.943
nuoC
NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
   0.941
rstB
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.804
envZ_2
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
creC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.655
ANB90897.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.554
sirA
Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.494
Your Current Organism:
Moraxella ovis
NCBI taxonomy Id: 29433
Other names: ATCC 33078, CCUG 354, DSM 18075, LMG 8381, LMG:8381, M. ovis, NCTC 11227, Neisseria ovis, strain 199/55
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.