Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
metG | ycfH | MOVS_03705 | MOVS_03265 | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
mscS_1 | oppA_2 | MOVS_03260 | MOVS_03270 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
mscS_1 | ycfH | MOVS_03260 | MOVS_03265 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
oppA_2 | mscS_1 | MOVS_03270 | MOVS_03260 | Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
oppA_2 | ycfH | MOVS_03270 | MOVS_03265 | Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
yceG | ycfH | MOVS_09835 | MOVS_03265 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
ycfH | metG | MOVS_03265 | MOVS_03705 | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.400 |
ycfH | mscS_1 | MOVS_03265 | MOVS_03260 | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
ycfH | oppA_2 | MOVS_03265 | MOVS_03270 | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
ycfH | yceG | MOVS_03265 | MOVS_09835 | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.674 |