STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG91232.1Acyl-CoA synthetase (NDP forming). (702 aa)    
Predicted Functional Partners:
SDG91202.1
Acyl dehydratase.
 
 
  0.964
SDI26893.1
Indolepyruvate ferredoxin oxidoreductase.
 
 
 0.918
SDI45131.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.856
SDG91108.1
3-methylfumaryl-CoA hydratase.
 
  
  0.814
fadB
Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.780
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.774
SDI01495.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
  
 
 0.773
SDH09598.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.766
SDI01138.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 
 0.757
SDI34129.1
Vanillin synthase /trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.756
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.