STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH00968.1tRNA 2-thiouridine synthesizing protein B. (99 aa)    
Predicted Functional Partners:
SDH00989.1
tRNA 2-thiouridine synthesizing protein C; Belongs to the DsrF/TusC family.
 
 0.999
SDH01022.1
tRNA 2-thiouridine synthesizing protein D.
 
 0.999
SDH00936.1
tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
 
 0.994
SDH00908.1
Anthranilate phosphoribosyltransferase.
  
    0.899
tusA
tRNA 2-thiouridine synthesizing protein A; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
  
 0.700
SDI29533.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
  
 0.698
SDH01053.1
Citrate synthase; Belongs to the citrate synthase family.
       0.683
SDH00883.1
Putative glutathione S-transferase.
       0.617
SDI46181.1
Uncharacterized membrane protein.
  
     0.420
SDI09523.1
Thioredoxin.
  
     0.406
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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