Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG83958.1 | SDG90889.1 | SAMN05216588_101142 | SAMN05216588_101381 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.405 |
SDG83958.1 | SDG90921.1 | SAMN05216588_101142 | SAMN05216588_101382 | Biopolymer transport protein ExbB. | Protein TonB. | 0.846 |
SDG83958.1 | SDH15398.1 | SAMN05216588_101142 | SAMN05216588_10311 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.880 |
SDG83958.1 | SDH15430.1 | SAMN05216588_101142 | SAMN05216588_10312 | Biopolymer transport protein ExbB. | Protein TonB. | 0.820 |
SDG83958.1 | SDI29193.1 | SAMN05216588_101142 | SAMN05216588_11496 | Biopolymer transport protein ExbB. | Colicin import membrane protein. | 0.820 |
SDG83958.1 | SDI81062.1 | SAMN05216588_101142 | SAMN05216588_12538 | Biopolymer transport protein ExbB. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.820 |
SDG83958.1 | SDI94378.1 | SAMN05216588_101142 | SAMN05216588_13016 | Biopolymer transport protein ExbB. | Protein TonB. | 0.957 |
SDG90889.1 | SDG83958.1 | SAMN05216588_101381 | SAMN05216588_101142 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.405 |
SDG90889.1 | SDG90921.1 | SAMN05216588_101381 | SAMN05216588_101382 | Biopolymer transport protein ExbB. | Protein TonB. | 0.973 |
SDG90889.1 | SDH15398.1 | SAMN05216588_101381 | SAMN05216588_10311 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.968 |
SDG90889.1 | SDH15430.1 | SAMN05216588_101381 | SAMN05216588_10312 | Biopolymer transport protein ExbB. | Protein TonB. | 0.817 |
SDG90889.1 | SDI29193.1 | SAMN05216588_101381 | SAMN05216588_11496 | Biopolymer transport protein ExbB. | Colicin import membrane protein. | 0.817 |
SDG90889.1 | SDI81062.1 | SAMN05216588_101381 | SAMN05216588_12538 | Biopolymer transport protein ExbB. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.833 |
SDG90889.1 | SDI94378.1 | SAMN05216588_101381 | SAMN05216588_13016 | Biopolymer transport protein ExbB. | Protein TonB. | 0.836 |
SDG90921.1 | SDG83958.1 | SAMN05216588_101382 | SAMN05216588_101142 | Protein TonB. | Biopolymer transport protein ExbB. | 0.846 |
SDG90921.1 | SDG90889.1 | SAMN05216588_101382 | SAMN05216588_101381 | Protein TonB. | Biopolymer transport protein ExbB. | 0.973 |
SDG90921.1 | SDH15368.1 | SAMN05216588_101382 | SAMN05216588_10310 | Protein TonB. | Biopolymer transport protein ExbB. | 0.840 |
SDG90921.1 | SDH15398.1 | SAMN05216588_101382 | SAMN05216588_10311 | Protein TonB. | Biopolymer transport protein ExbD. | 0.881 |
SDG90921.1 | tolQ | SAMN05216588_101382 | SAMN05216588_11494 | Protein TonB. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.827 |
SDG90921.1 | tolQ-2 | SAMN05216588_101382 | SAMN05216588_12540 | Protein TonB. | Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.820 |
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