Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH16050.1 | SDH17362.1 | SAMN05216588_10331 | SAMN05216588_10371 | Choline dehydrogenase. | Ankyrin. | 0.832 |
SDH16050.1 | SDI16727.1 | SAMN05216588_10331 | SAMN05216588_11252 | Choline dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.775 |
SDH17362.1 | SDH16050.1 | SAMN05216588_10371 | SAMN05216588_10331 | Ankyrin. | Choline dehydrogenase. | 0.832 |
SDH17362.1 | SDH68487.1 | SAMN05216588_10371 | SAMN05216588_106195 | Ankyrin. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.839 |
SDH17362.1 | SDH78840.1 | SAMN05216588_10371 | SAMN05216588_107191 | Ankyrin. | Z1 domain-containing protein. | 0.957 |
SDH17362.1 | SDI03473.1 | SAMN05216588_10371 | SAMN05216588_110121 | Ankyrin. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.866 |
SDH17362.1 | SDI04108.1 | SAMN05216588_10371 | SAMN05216588_110140 | Ankyrin. | Gluconate 2-dehydrogenase alpha chain. | 0.832 |
SDH17362.1 | SDI16727.1 | SAMN05216588_10371 | SAMN05216588_11252 | Ankyrin. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.906 |
SDH17362.1 | SDI65024.1 | SAMN05216588_10371 | SAMN05216588_12132 | Ankyrin. | Ca2+-binding protein, EF-hand superfamily. | 0.937 |
SDH17362.1 | apaH | SAMN05216588_10371 | SAMN05216588_108200 | Ankyrin. | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.960 |
SDH17362.1 | nuoC | SAMN05216588_10371 | SAMN05216588_11362 | Ankyrin. | NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.955 |
SDH17362.1 | rpsC | SAMN05216588_10371 | SAMN05216588_11133 | Ankyrin. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.882 |
SDH68487.1 | SDH17362.1 | SAMN05216588_106195 | SAMN05216588_10371 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Ankyrin. | 0.839 |
SDH68487.1 | SDH78840.1 | SAMN05216588_106195 | SAMN05216588_107191 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Z1 domain-containing protein. | 0.643 |
SDH68487.1 | SDI16727.1 | SAMN05216588_106195 | SAMN05216588_11252 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.415 |
SDH68487.1 | SDI65024.1 | SAMN05216588_106195 | SAMN05216588_12132 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Ca2+-binding protein, EF-hand superfamily. | 0.724 |
SDH68487.1 | apaH | SAMN05216588_106195 | SAMN05216588_108200 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.640 |
SDH68487.1 | rpsC | SAMN05216588_106195 | SAMN05216588_11133 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.979 |
SDH78840.1 | SDH17362.1 | SAMN05216588_107191 | SAMN05216588_10371 | Z1 domain-containing protein. | Ankyrin. | 0.957 |
SDH78840.1 | SDH68487.1 | SAMN05216588_107191 | SAMN05216588_106195 | Z1 domain-containing protein. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.643 |
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