STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH39263.1Protein of unknown function. (667 aa)    
Predicted Functional Partners:
SDH39293.1
Protein of unknown function.
 
    0.970
SDH39328.1
Uncharacterized protein.
 
    0.911
SDG80553.1
Protein of unknown function.
 
    0.895
SDI44998.1
Protein of unknown function.
 
    0.895
SDH39365.1
Hypothetical protein.
 
    0.868
SDG80583.1
Uncharacterized protein.
 
    0.845
SDG80616.1
Hypothetical protein.
 
    0.783
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.655
SDH09174.1
Phospholipid-binding lipoprotein MlaA.
    
 
 0.629
SDH42403.1
Phospholipid-binding lipoprotein MlaA.
    
 
 0.629
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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