STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH77077.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (174 aa)    
Predicted Functional Partners:
SDH77104.1
Hypothetical protein.
  
    0.826
SDH21309.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.743
SDH21589.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.743
SDJ02186.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.743
SDH77058.1
NUDIX domain-containing protein.
  
    0.742
SDH75781.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.596
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.547
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
    
  0.539
SDI60491.1
Pyruvate carboxylase subunit B.
    
  0.535
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.532
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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