STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH74232.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SDH87740.1
Glycine cleavage system regulatory protein.
  
    0.717
SDI46034.1
Hypothetical protein.
  
     0.688
SDI94261.1
Twitching motility protein PilI.
  
    0.671
SDI24112.1
Hypothetical protein.
  
     0.641
SDG91606.1
Pilus assembly protein FimV.
  
     0.625
SDH69883.1
MJ0042 family finger-like domain-containing protein.
  
     0.618
SDI24023.1
Hypothetical protein.
  
     0.618
SDI28451.1
Hypothetical protein.
  
     0.612
SDH68037.1
Cell division protein ZapB.
  
     0.607
SDI94109.1
Chemosensory pili system protein ChpC.
  
     0.598
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.