STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75905.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)    
Predicted Functional Partners:
SDI22155.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.908
SDI26893.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.899
SDH09598.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.857
cysN
Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.819
SDI45131.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.819
SDH38811.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.788
SDH66017.1
Glutamate synthase (NADPH) small subunit.
  
 0.764
SDH08098.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
 0.737
SDH75761.1
NAD(P)H-flavin reductase.
    
 0.736
SDH79386.1
Rhodanese-related sulfurtransferase.
    
 0.730
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.