STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73763.1Uncharacterized membrane protein YebE, DUF533 family. (242 aa)    
Predicted Functional Partners:
htpX
Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family.
  
    0.584
SDH06963.1
Protein refolding chaperone Spy/CpxP family.
   
  
 0.541
SDH56560.1
Ca2+:H+ antiporter.
  
    0.528
SDG88031.1
Zn-dependent protease with chaperone function.
   
    0.518
SDH73854.1
Chemotaxis protein methyltransferase WspC.
       0.513
SDH73878.1
Chemotaxis-related protein WspD.
       0.509
SDH73795.1
Methyl-accepting chemotaxis protein WspA.
       0.487
SDH73827.1
Chemotaxis-related protein WspB.
       0.487
SDH73910.1
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE.
       0.484
SDH75269.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.470
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.