Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH95510.1 | SDI02812.1 | SAMN05216588_109112 | SAMN05216588_11099 | PhoH-like ATPase. | EamA domain-containing membrane protein RarD. | 0.407 |
SDI02673.1 | SDI02812.1 | SAMN05216588_11094 | SAMN05216588_11099 | Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | EamA domain-containing membrane protein RarD. | 0.400 |
SDI02778.1 | SDI02812.1 | SAMN05216588_11098 | SAMN05216588_11099 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | EamA domain-containing membrane protein RarD. | 0.700 |
SDI02778.1 | SDI02846.1 | SAMN05216588_11098 | SAMN05216588_110100 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Helix-turn-helix domain-containing protein. | 0.477 |
SDI02812.1 | SDH95510.1 | SAMN05216588_11099 | SAMN05216588_109112 | EamA domain-containing membrane protein RarD. | PhoH-like ATPase. | 0.407 |
SDI02812.1 | SDI02673.1 | SAMN05216588_11099 | SAMN05216588_11094 | EamA domain-containing membrane protein RarD. | Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.400 |
SDI02812.1 | SDI02778.1 | SAMN05216588_11099 | SAMN05216588_11098 | EamA domain-containing membrane protein RarD. | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | 0.700 |
SDI02812.1 | SDI02846.1 | SAMN05216588_11099 | SAMN05216588_110100 | EamA domain-containing membrane protein RarD. | Helix-turn-helix domain-containing protein. | 0.523 |
SDI02846.1 | SDI02778.1 | SAMN05216588_110100 | SAMN05216588_11098 | Helix-turn-helix domain-containing protein. | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | 0.477 |
SDI02846.1 | SDI02812.1 | SAMN05216588_110100 | SAMN05216588_11099 | Helix-turn-helix domain-containing protein. | EamA domain-containing membrane protein RarD. | 0.523 |