Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG89692.1 | SDI03163.1 | SAMN05216588_101346 | SAMN05216588_110111 | Helix-turn-helix. | Hypothetical protein. | 0.513 |
SDG89692.1 | SDI23012.1 | SAMN05216588_101346 | SAMN05216588_11378 | Helix-turn-helix. | Peptidase propeptide and YPEB domain-containing protein. | 0.504 |
SDG89692.1 | SDI23043.1 | SAMN05216588_101346 | SAMN05216588_11379 | Helix-turn-helix. | Uncharacterized membrane protein YkoI. | 0.697 |
SDG89692.1 | SDI44610.1 | SAMN05216588_101346 | SAMN05216588_11714 | Helix-turn-helix. | Uncharacterized lipoprotein. | 0.617 |
SDG89692.1 | SDI89678.1 | SAMN05216588_101346 | SAMN05216588_1285 | Helix-turn-helix. | Glycerol-3-phosphate dehydrogenase. | 0.542 |
SDH19608.1 | SDI23012.1 | SAMN05216588_103138 | SAMN05216588_11378 | TIGR00156 family protein. | Peptidase propeptide and YPEB domain-containing protein. | 0.641 |
SDH19608.1 | SDI23043.1 | SAMN05216588_103138 | SAMN05216588_11379 | TIGR00156 family protein. | Uncharacterized membrane protein YkoI. | 0.905 |
SDH20355.1 | SDI23012.1 | SAMN05216588_103164 | SAMN05216588_11378 | Protein of unknown function. | Peptidase propeptide and YPEB domain-containing protein. | 0.641 |
SDH20355.1 | SDI23043.1 | SAMN05216588_103164 | SAMN05216588_11379 | Protein of unknown function. | Uncharacterized membrane protein YkoI. | 0.641 |
SDI03163.1 | SDG89692.1 | SAMN05216588_110111 | SAMN05216588_101346 | Hypothetical protein. | Helix-turn-helix. | 0.513 |
SDI03163.1 | SDI12512.1 | SAMN05216588_110111 | SAMN05216588_111175 | Hypothetical protein. | Phospholipid transport system substrate-binding protein. | 0.450 |
SDI03163.1 | SDI23012.1 | SAMN05216588_110111 | SAMN05216588_11378 | Hypothetical protein. | Peptidase propeptide and YPEB domain-containing protein. | 0.525 |
SDI03163.1 | SDI23043.1 | SAMN05216588_110111 | SAMN05216588_11379 | Hypothetical protein. | Uncharacterized membrane protein YkoI. | 0.641 |
SDI03163.1 | SDI44610.1 | SAMN05216588_110111 | SAMN05216588_11714 | Hypothetical protein. | Uncharacterized lipoprotein. | 0.597 |
SDI03163.1 | SDI89678.1 | SAMN05216588_110111 | SAMN05216588_1285 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase. | 0.701 |
SDI12512.1 | SDI03163.1 | SAMN05216588_111175 | SAMN05216588_110111 | Phospholipid transport system substrate-binding protein. | Hypothetical protein. | 0.450 |
SDI12512.1 | SDI23012.1 | SAMN05216588_111175 | SAMN05216588_11378 | Phospholipid transport system substrate-binding protein. | Peptidase propeptide and YPEB domain-containing protein. | 0.600 |
SDI12512.1 | SDI23043.1 | SAMN05216588_111175 | SAMN05216588_11379 | Phospholipid transport system substrate-binding protein. | Uncharacterized membrane protein YkoI. | 0.769 |
SDI12512.1 | SDI44610.1 | SAMN05216588_111175 | SAMN05216588_11714 | Phospholipid transport system substrate-binding protein. | Uncharacterized lipoprotein. | 0.705 |
SDI22949.1 | SDI22978.1 | SAMN05216588_11376 | SAMN05216588_11377 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.991 |
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