Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH00669.1 | SDH07886.1 | SAMN05216588_10298 | SAMN05216588_102337 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Chorismate mutase. | 0.525 |
SDH00669.1 | SDH96280.1 | SAMN05216588_10298 | SAMN05216588_109136 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Homoserine dehydrogenase. | 0.889 |
SDH00669.1 | SDI16727.1 | SAMN05216588_10298 | SAMN05216588_11252 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.443 |
SDH00669.1 | SDI23358.1 | SAMN05216588_10298 | SAMN05216588_11390 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.475 |
SDH00669.1 | SDI29402.1 | SAMN05216588_10298 | SAMN05216588_114103 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Branched-chain amino acid aminotransferase. | 0.807 |
SDH00669.1 | leuA | SAMN05216588_10298 | SAMN05216588_107252 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.794 |
SDH07886.1 | SDH00669.1 | SAMN05216588_102337 | SAMN05216588_10298 | Chorismate mutase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.525 |
SDH07886.1 | SDH85270.1 | SAMN05216588_102337 | SAMN05216588_10832 | Chorismate mutase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.488 |
SDH07886.1 | SDH96280.1 | SAMN05216588_102337 | SAMN05216588_109136 | Chorismate mutase. | Homoserine dehydrogenase. | 0.917 |
SDH07886.1 | SDI16727.1 | SAMN05216588_102337 | SAMN05216588_11252 | Chorismate mutase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.810 |
SDH07886.1 | SDI23358.1 | SAMN05216588_102337 | SAMN05216588_11390 | Chorismate mutase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.576 |
SDH07886.1 | SDI29402.1 | SAMN05216588_102337 | SAMN05216588_114103 | Chorismate mutase. | Branched-chain amino acid aminotransferase. | 0.862 |
SDH07886.1 | SDI34079.1 | SAMN05216588_102337 | SAMN05216588_11530 | Chorismate mutase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.594 |
SDH07886.1 | edd | SAMN05216588_102337 | SAMN05216588_102268 | Chorismate mutase. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.413 |
SDH07886.1 | ilvD | SAMN05216588_102337 | SAMN05216588_12147 | Chorismate mutase. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.517 |
SDH07886.1 | leuA | SAMN05216588_102337 | SAMN05216588_107252 | Chorismate mutase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.675 |
SDH85270.1 | SDH07886.1 | SAMN05216588_10832 | SAMN05216588_102337 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Chorismate mutase. | 0.488 |
SDH85270.1 | SDH96280.1 | SAMN05216588_10832 | SAMN05216588_109136 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Homoserine dehydrogenase. | 0.889 |
SDH85270.1 | SDI16727.1 | SAMN05216588_10832 | SAMN05216588_11252 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.443 |
SDH85270.1 | SDI23358.1 | SAMN05216588_10832 | SAMN05216588_11390 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.475 |
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