Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG80647.1 | SDH75164.1 | SAMN05216588_10124 | SAMN05216588_10755 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.998 |
SDG80647.1 | SDI04216.1 | SAMN05216588_10124 | SAMN05216588_110144 | Hypothetical protein. | Hypothetical protein. | 0.998 |
SDG80647.1 | SDI12252.1 | SAMN05216588_10124 | SAMN05216588_111166 | Hypothetical protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.649 |
SDG80647.1 | SDI23243.1 | SAMN05216588_10124 | SAMN05216588_11386 | Hypothetical protein. | Chemotaxis protein CheY-P-specific phosphatase CheC. | 0.957 |
SDG80647.1 | SDI27908.1 | SAMN05216588_10124 | SAMN05216588_11450 | Hypothetical protein. | Sigma-54 specific transcriptional regulator, flagellar regulatory protein A. | 0.845 |
SDG80647.1 | SDI34573.1 | SAMN05216588_10124 | SAMN05216588_11546 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.998 |
SDG80647.1 | SDI45074.1 | SAMN05216588_10124 | SAMN05216588_11731 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.996 |
SDG80647.1 | SDI76088.1 | SAMN05216588_10124 | SAMN05216588_1248 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SDG80647.1 | SDI87798.1 | SAMN05216588_10124 | SAMN05216588_12741 | Hypothetical protein. | Na+/proline symporter. | 0.999 |
SDH75164.1 | SDG80647.1 | SAMN05216588_10755 | SAMN05216588_10124 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.998 |
SDH75164.1 | SDI04216.1 | SAMN05216588_10755 | SAMN05216588_110144 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.998 |
SDH75164.1 | SDI12252.1 | SAMN05216588_10755 | SAMN05216588_111166 | PAS domain S-box-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.649 |
SDH75164.1 | SDI23243.1 | SAMN05216588_10755 | SAMN05216588_11386 | PAS domain S-box-containing protein. | Chemotaxis protein CheY-P-specific phosphatase CheC. | 0.957 |
SDH75164.1 | SDI27908.1 | SAMN05216588_10755 | SAMN05216588_11450 | PAS domain S-box-containing protein. | Sigma-54 specific transcriptional regulator, flagellar regulatory protein A. | 0.845 |
SDH75164.1 | SDI34573.1 | SAMN05216588_10755 | SAMN05216588_11546 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.998 |
SDH75164.1 | SDI45074.1 | SAMN05216588_10755 | SAMN05216588_11731 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.996 |
SDH75164.1 | SDI76088.1 | SAMN05216588_10755 | SAMN05216588_1248 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDH75164.1 | SDI87798.1 | SAMN05216588_10755 | SAMN05216588_12741 | PAS domain S-box-containing protein. | Na+/proline symporter. | 0.999 |
SDI04216.1 | SDG80647.1 | SAMN05216588_110144 | SAMN05216588_10124 | Hypothetical protein. | Hypothetical protein. | 0.998 |
SDI04216.1 | SDH75164.1 | SAMN05216588_110144 | SAMN05216588_10755 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.998 |
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