Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH01368.1 | sstT | SAMN05216588_102123 | SAMN05216588_11916 | Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids. | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.555 |
SDI45131.1 | guaA | SAMN05216588_11733 | SAMN05216588_107140 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.735 |
SDI45131.1 | sstT | SAMN05216588_11733 | SAMN05216588_11916 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.445 |
SDI55286.1 | sstT | SAMN05216588_11915 | SAMN05216588_11916 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.518 |
guaA | SDI45131.1 | SAMN05216588_107140 | SAMN05216588_11733 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.735 |
guaA | sstT | SAMN05216588_107140 | SAMN05216588_11916 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.420 |
sstT | SDH01368.1 | SAMN05216588_11916 | SAMN05216588_102123 | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids. | 0.555 |
sstT | SDI45131.1 | SAMN05216588_11916 | SAMN05216588_11733 | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.445 |
sstT | SDI55286.1 | SAMN05216588_11916 | SAMN05216588_11915 | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.518 |
sstT | guaA | SAMN05216588_11916 | SAMN05216588_107140 | Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.420 |