STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI60340.1Gamma-glutamyltranspeptidase / glutathione hydrolase. (527 aa)    
Predicted Functional Partners:
SDH65992.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.771
SDI57738.1
Urea carboxylase.
   
 
 0.737
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.726
SDI76925.1
Sensor histidine kinase inhibitor, KipI family.
   
 
  0.725
SDI60304.1
TRAP transporter, DctM subunit.
 
     0.599
SDI60243.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
     0.598
SDI60276.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.598
SDI87798.1
Na+/proline symporter.
  
 
 0.589
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.542
SDI16433.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
  
 
0.535
Your Current Organism:
Pseudomonas flavescens
NCBI taxonomy Id: 29435
Other names: ATCC 51555, CCUG 49622, CFBP 5586, CIP 104204, DSM 12071, JCM 21586, LMG 18387, LMG:18387, NBRC 103044, NCPPB 3063, P. flavescens, strain B62
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.