Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH38811.1 | SDI16727.1 | SAMN05216588_104220 | SAMN05216588_11252 | 2,4-dienoyl-CoA reductase (NADPH2). | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.887 |
SDH38811.1 | SDI61812.1 | SAMN05216588_104220 | SAMN05216588_12086 | 2,4-dienoyl-CoA reductase (NADPH2). | N-methylglutamate synthase subunit B. | 0.993 |
SDH38811.1 | SDI62055.1 | SAMN05216588_104220 | SAMN05216588_12094 | 2,4-dienoyl-CoA reductase (NADPH2). | Aminomethyltransferase; Belongs to the GcvT family. | 0.726 |
SDH38811.1 | SDI62092.1 | SAMN05216588_104220 | SAMN05216588_12095 | 2,4-dienoyl-CoA reductase (NADPH2). | Trimethylamine monooxygenase. | 0.768 |
SDH38811.1 | SDI62188.1 | SAMN05216588_104220 | SAMN05216588_12098 | 2,4-dienoyl-CoA reductase (NADPH2). | Ferredoxin-NADP reductase. | 0.928 |
SDI16727.1 | SDH38811.1 | SAMN05216588_11252 | SAMN05216588_104220 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.887 |
SDI16727.1 | SDI61812.1 | SAMN05216588_11252 | SAMN05216588_12086 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | N-methylglutamate synthase subunit B. | 0.729 |
SDI16727.1 | SDI62055.1 | SAMN05216588_11252 | SAMN05216588_12094 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.773 |
SDI16727.1 | SDI62092.1 | SAMN05216588_11252 | SAMN05216588_12095 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Trimethylamine monooxygenase. | 0.796 |
SDI16727.1 | SDI62119.1 | SAMN05216588_11252 | SAMN05216588_12096 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.765 |
SDI16727.1 | SDI62188.1 | SAMN05216588_11252 | SAMN05216588_12098 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ferredoxin-NADP reductase. | 0.932 |
SDI16727.1 | SDI65024.1 | SAMN05216588_11252 | SAMN05216588_12132 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ca2+-binding protein, EF-hand superfamily. | 0.450 |
SDI16727.1 | atpA | SAMN05216588_11252 | SAMN05216588_103325 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.668 |
SDI61812.1 | SDH38811.1 | SAMN05216588_12086 | SAMN05216588_104220 | N-methylglutamate synthase subunit B. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.993 |
SDI61812.1 | SDI16727.1 | SAMN05216588_12086 | SAMN05216588_11252 | N-methylglutamate synthase subunit B. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.729 |
SDI61812.1 | SDI62055.1 | SAMN05216588_12086 | SAMN05216588_12094 | N-methylglutamate synthase subunit B. | Aminomethyltransferase; Belongs to the GcvT family. | 0.930 |
SDI61812.1 | SDI62092.1 | SAMN05216588_12086 | SAMN05216588_12095 | N-methylglutamate synthase subunit B. | Trimethylamine monooxygenase. | 0.766 |
SDI61812.1 | SDI62119.1 | SAMN05216588_12086 | SAMN05216588_12096 | N-methylglutamate synthase subunit B. | Aminomethyltransferase; Belongs to the GcvT family. | 0.800 |
SDI61812.1 | SDI62153.1 | SAMN05216588_12086 | SAMN05216588_12097 | N-methylglutamate synthase subunit B. | Protein of unknown function. | 0.772 |
SDI61812.1 | SDI62188.1 | SAMN05216588_12086 | SAMN05216588_12098 | N-methylglutamate synthase subunit B. | Ferredoxin-NADP reductase. | 0.610 |
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