Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI41767.1 | SDI72607.1 | SAMN05216588_116104 | SAMN05216588_12316 | Lactate oxidase. | Hypothetical protein. | 0.533 |
SDI41767.1 | lldD | SAMN05216588_116104 | SAMN05216588_105219 | Lactate oxidase. | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | 0.548 |
SDI72607.1 | SDI41767.1 | SAMN05216588_12316 | SAMN05216588_116104 | Hypothetical protein. | Lactate oxidase. | 0.533 |
SDI72607.1 | SDI72633.1 | SAMN05216588_12316 | SAMN05216588_12317 | Hypothetical protein. | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | 0.508 |
SDI72607.1 | SDI72649.1 | SAMN05216588_12316 | SAMN05216588_12318 | Hypothetical protein. | Protein of unknown function. | 0.508 |
SDI72607.1 | lldD | SAMN05216588_12316 | SAMN05216588_105219 | Hypothetical protein. | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | 0.533 |
SDI72607.1 | trpA | SAMN05216588_12316 | SAMN05216588_12133 | Hypothetical protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.627 |
SDI72633.1 | SDI72607.1 | SAMN05216588_12317 | SAMN05216588_12316 | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | Hypothetical protein. | 0.508 |
SDI72633.1 | SDI72649.1 | SAMN05216588_12317 | SAMN05216588_12318 | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | Protein of unknown function. | 0.813 |
SDI72649.1 | SDI72607.1 | SAMN05216588_12318 | SAMN05216588_12316 | Protein of unknown function. | Hypothetical protein. | 0.508 |
SDI72649.1 | SDI72633.1 | SAMN05216588_12318 | SAMN05216588_12317 | Protein of unknown function. | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | 0.813 |
lldD | SDI41767.1 | SAMN05216588_105219 | SAMN05216588_116104 | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | Lactate oxidase. | 0.548 |
lldD | SDI72607.1 | SAMN05216588_105219 | SAMN05216588_12316 | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | Hypothetical protein. | 0.533 |
trpA | SDI72607.1 | SAMN05216588_12133 | SAMN05216588_12316 | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Hypothetical protein. | 0.627 |