Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI87970.1 | SDI88006.1 | SAMN05216588_12746 | SAMN05216588_12747 | Exo-poly-alpha-galacturonosidase; Belongs to the glycosyl hydrolase 28 family. | DNA recombination protein RmuC. | 0.469 |
SDI88006.1 | SDI87970.1 | SAMN05216588_12747 | SAMN05216588_12746 | DNA recombination protein RmuC. | Exo-poly-alpha-galacturonosidase; Belongs to the glycosyl hydrolase 28 family. | 0.469 |
SDI88006.1 | SDI88044.1 | SAMN05216588_12747 | SAMN05216588_12748 | DNA recombination protein RmuC. | Sel1 repeat-containing protein. | 0.648 |
SDI88006.1 | nnrD | SAMN05216588_12747 | SAMN05216588_11961 | DNA recombination protein RmuC. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.531 |
SDI88044.1 | SDI88006.1 | SAMN05216588_12748 | SAMN05216588_12747 | Sel1 repeat-containing protein. | DNA recombination protein RmuC. | 0.648 |
nnrD | SDI88006.1 | SAMN05216588_11961 | SAMN05216588_12747 | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | DNA recombination protein RmuC. | 0.531 |