Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG83930.1 | SDG83958.1 | SAMN05216588_101141 | SAMN05216588_101142 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.994 |
SDG83930.1 | SDG90889.1 | SAMN05216588_101141 | SAMN05216588_101381 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.894 |
SDG83930.1 | SDH15368.1 | SAMN05216588_101141 | SAMN05216588_10310 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.857 |
SDG83930.1 | SDH85448.1 | SAMN05216588_101141 | SAMN05216588_10838 | Biopolymer transport protein ExbD. | Vitamin B12 transporter. | 0.648 |
SDG83930.1 | SDI94378.1 | SAMN05216588_101141 | SAMN05216588_13016 | Biopolymer transport protein ExbD. | Protein TonB. | 0.956 |
SDG83958.1 | SDG83930.1 | SAMN05216588_101142 | SAMN05216588_101141 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.994 |
SDG83958.1 | SDG90854.1 | SAMN05216588_101142 | SAMN05216588_101380 | Biopolymer transport protein ExbB. | Biopolymer transport protein TolR. | 0.887 |
SDG83958.1 | SDG90889.1 | SAMN05216588_101142 | SAMN05216588_101381 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.405 |
SDG83958.1 | SDH15398.1 | SAMN05216588_101142 | SAMN05216588_10311 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.880 |
SDG83958.1 | SDH85448.1 | SAMN05216588_101142 | SAMN05216588_10838 | Biopolymer transport protein ExbB. | Vitamin B12 transporter. | 0.710 |
SDG83958.1 | SDI94378.1 | SAMN05216588_101142 | SAMN05216588_13016 | Biopolymer transport protein ExbB. | Protein TonB. | 0.957 |
SDG83958.1 | tolR | SAMN05216588_101142 | SAMN05216588_11495 | Biopolymer transport protein ExbB. | Biopolymer transport protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.861 |
SDG83958.1 | tolR-2 | SAMN05216588_101142 | SAMN05216588_12539 | Biopolymer transport protein ExbB. | Biopolymer transport protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.881 |
SDG90854.1 | SDG83958.1 | SAMN05216588_101380 | SAMN05216588_101142 | Biopolymer transport protein TolR. | Biopolymer transport protein ExbB. | 0.887 |
SDG90854.1 | SDG90889.1 | SAMN05216588_101380 | SAMN05216588_101381 | Biopolymer transport protein TolR. | Biopolymer transport protein ExbB. | 0.994 |
SDG90854.1 | SDH15368.1 | SAMN05216588_101380 | SAMN05216588_10310 | Biopolymer transport protein TolR. | Biopolymer transport protein ExbB. | 0.963 |
SDG90854.1 | SDH85448.1 | SAMN05216588_101380 | SAMN05216588_10838 | Biopolymer transport protein TolR. | Vitamin B12 transporter. | 0.592 |
SDG90854.1 | SDI94378.1 | SAMN05216588_101380 | SAMN05216588_13016 | Biopolymer transport protein TolR. | Protein TonB. | 0.879 |
SDG90889.1 | SDG83930.1 | SAMN05216588_101381 | SAMN05216588_101141 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.894 |
SDG90889.1 | SDG83958.1 | SAMN05216588_101381 | SAMN05216588_101142 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.405 |
page 1 of 4