Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH07309.1 | SDH09486.1 | SAMN05216588_102319 | SAMN05216588_102392 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.450 |
SDH07309.1 | SDH16316.1 | SAMN05216588_102319 | SAMN05216588_10339 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase. | 0.474 |
SDH07309.1 | SDH63542.1 | SAMN05216588_102319 | SAMN05216588_10633 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.475 |
SDH07309.1 | SDH95360.1 | SAMN05216588_102319 | SAMN05216588_109107 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.464 |
SDH07309.1 | SDH96690.1 | SAMN05216588_102319 | SAMN05216588_109149 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.490 |
SDH07309.1 | SDI23215.1 | SAMN05216588_102319 | SAMN05216588_11385 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.447 |
SDH07309.1 | SDI45074.1 | SAMN05216588_102319 | SAMN05216588_11731 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.864 |
SDH07309.1 | SDI57222.1 | SAMN05216588_102319 | SAMN05216588_11982 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.501 |
SDH07309.1 | SDI99956.1 | SAMN05216588_102319 | SAMN05216588_1336 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.874 |
SDH09486.1 | SDH07309.1 | SAMN05216588_102392 | SAMN05216588_102319 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.450 |
SDH09486.1 | SDH16316.1 | SAMN05216588_102392 | SAMN05216588_10339 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase. | 0.479 |
SDH09486.1 | SDH63542.1 | SAMN05216588_102392 | SAMN05216588_10633 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.844 |
SDH09486.1 | SDH95360.1 | SAMN05216588_102392 | SAMN05216588_109107 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.802 |
SDH09486.1 | SDH96690.1 | SAMN05216588_102392 | SAMN05216588_109149 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.704 |
SDH09486.1 | SDI23215.1 | SAMN05216588_102392 | SAMN05216588_11385 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.749 |
SDH09486.1 | SDI45074.1 | SAMN05216588_102392 | SAMN05216588_11731 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.951 |
SDH09486.1 | SDI57222.1 | SAMN05216588_102392 | SAMN05216588_11982 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.481 |
SDH09486.1 | SDI96917.1 | SAMN05216588_102392 | SAMN05216588_13138 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.472 |
SDH09486.1 | SDI99956.1 | SAMN05216588_102392 | SAMN05216588_1336 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.868 |
SDH16316.1 | SDH07309.1 | SAMN05216588_10339 | SAMN05216588_102319 | Diguanylate cyclase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.474 |
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