Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
KIU53003.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)    
Predicted Functional Partners:
KIU52674.1
Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.857
KIU52678.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
KIU52675.1
Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
KIU53001.1
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.754
KIU43045.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.634
KIU52997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
KIU51984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.602
KIU45798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.602
KIU52996.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.582
KIU53007.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.582
Your Current Organism:
Bradyrhizobium elkanii
NCBI taxonomy Id: 29448
Other names: ATCC 49852, B. elkanii, Bradyrhizobium sp. AK1, Bradyrhizobium sp. AK3, Bradyrhizobium sp. URO14, Bradyrhizobium sp. URO7, Bradyrhizobium sp. mas1, Bradyrhizobium sp. mas10, Bradyrhizobium sp. mas11, Bradyrhizobium sp. mas12, Bradyrhizobium sp. mas17, Bradyrhizobium sp. mas18, Bradyrhizobium sp. mas19, Bradyrhizobium sp. mas20, Bradyrhizobium sp. mas21, Bradyrhizobium sp. mas22, Bradyrhizobium sp. mas23, Bradyrhizobium sp. mas25, Bradyrhizobium sp. mas26, Bradyrhizobium sp. mas27, Bradyrhizobium sp. mas29, Bradyrhizobium sp. mas30, Bradyrhizobium sp. mas31, Bradyrhizobium sp. mas40, Bradyrhizobium sp. mas42, Bradyrhizobium sp. mas6, Bradyrhizobium sp. mas7, Bradyrhizobium sp. mas8, Bradyrhizobium sp. mas9, DSM 11554, IFO 14791, LMG 6134, LMG:6134, NBRC 14791, USDA 76
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