KIU52454.1 protein (Bradyrhizobium elkanii) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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protein homology

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KIU52454.1

Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa)

Predicted Functional Partners:

KIU52455.1

0.868

KIU52456.1

0.860

KIU47115.1

0.706

carQ

0.692

rpoC

0.577

KIU44239.1

0.574

rpoB

0.546

KIU46417.1

0.528

KIU46480.1

0.526

KIU42844.1

0.512

Your Current Organism:

Bradyrhizobium elkanii

NCBI taxonomy Id: 29448
Other names: ATCC 49852, B. elkanii, Bradyrhizobium sp. AK1, Bradyrhizobium sp. AK3, Bradyrhizobium sp. URO14, Bradyrhizobium sp. URO7, Bradyrhizobium sp. mas1, Bradyrhizobium sp. mas10, Bradyrhizobium sp. mas11, Bradyrhizobium sp. mas12, Bradyrhizobium sp. mas17, Bradyrhizobium sp. mas18, Bradyrhizobium sp. mas19, Bradyrhizobium sp. mas20, Bradyrhizobium sp. mas21, Bradyrhizobium sp. mas22, Bradyrhizobium sp. mas23, Bradyrhizobium sp. mas25, Bradyrhizobium sp. mas26, Bradyrhizobium sp. mas27, Bradyrhizobium sp. mas29, Bradyrhizobium sp. mas30, Bradyrhizobium sp. mas31, Bradyrhizobium sp. mas40, Bradyrhizobium sp. mas42, Bradyrhizobium sp. mas6, Bradyrhizobium sp. mas7, Bradyrhizobium sp. mas8, Bradyrhizobium sp. mas9, DSM 11554, IFO 14791, LMG 6134, LMG:6134, NBRC 14791, USDA 76

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KIU42844.1	KIU44239.1	QU41_32165	QU41_32060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.700
KIU42844.1	KIU47115.1	QU41_32165	QU41_18280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.476
KIU42844.1	KIU52454.1	QU41_32165	QU41_02785	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.512
KIU42844.1	KIU52456.1	QU41_32165	QU41_02795	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
KIU42844.1	carQ	QU41_32165	QU41_13050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.476
KIU44239.1	KIU42844.1	QU41_32060	QU41_32165	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
KIU44239.1	KIU46417.1	QU41_32060	QU41_22550	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
KIU44239.1	KIU47115.1	QU41_32060	QU41_18280	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.507
KIU44239.1	KIU52454.1	QU41_32060	QU41_02785	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.574
KIU44239.1	rpoB	QU41_32060	QU41_07705	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.546
KIU44239.1	rpoC	QU41_32060	QU41_07710	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.577
KIU46417.1	KIU44239.1	QU41_22550	QU41_32060	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.465
KIU46417.1	KIU47115.1	QU41_22550	QU41_18280	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.536
KIU46417.1	KIU52454.1	QU41_22550	QU41_02785	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.528
KIU46417.1	KIU52456.1	QU41_22550	QU41_02795	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
KIU46417.1	carQ	QU41_22550	QU41_13050	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.465
KIU46480.1	KIU52454.1	QU41_21505	QU41_02785	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.526
KIU46480.1	KIU52456.1	QU41_21505	QU41_02795	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
KIU47115.1	KIU42844.1	QU41_18280	QU41_32165	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
KIU47115.1	KIU44239.1	QU41_18280	QU41_32060	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.507

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