STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ09846.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
ARQ09845.1
Hypothetical protein.
       0.773
ARQ09847.1
Exodeoxyribonuclease III xth protein; Protein involved in nuclease activity and DNA repair.
       0.566
Your Current Organism:
Rhizobium etli
NCBI taxonomy Id: 29449
Other names: ATCC 51251, CFN 42, CIP 104814, DSM 11541, IFO 15573, JCM 21823, LMG 17827, LMG:17827, NBRC 15573, R. etli, Rhizobium sp. Egypt 11, Rhizobium sp. NGB-FR-101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.