STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhCXanthine dehydrogenase accessory protein XdhC. (270 aa)    
Predicted Functional Partners:
xdhB
Xanthine dehydrogenase molybdopterin binding subunit XdhB; Protein involved in molybdenum ion binding and oxidation-reduction process.
 
  
 0.957
xdhA
Xanthine dehydrogenase small subunit XdhA; Protein involved in UDP-N-acetylmuramate dehydrogenase activity, flavin adenine dinucleotide binding and oxidation-reduction process.
 
  
 0.882
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
  
 0.809
ARQ11244.1
5-hydroxyisourate hydrolase protein; Protein involved in transport; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.757
ARQ11247.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase protein; Protein involved in allantoin biosynthetic process.
 
     0.744
ARQ11233.1
Cytochrome-c class 1 protein; Protein involved in iron ion binding, electron carrier activity and heme binding.
 
     0.743
ARQ11248.1
Urate catabolism protein; Protein involved in catalytic activity and carbohydrate metabolic process.
 
     0.710
allA
Ureidoglycolate lyase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
     0.427
Your Current Organism:
Rhizobium etli
NCBI taxonomy Id: 29449
Other names: ATCC 51251, CFN 42, CIP 104814, DSM 11541, IFO 15573, JCM 21823, LMG 17827, LMG:17827, NBRC 15573, R. etli, Rhizobium sp. Egypt 11, Rhizobium sp. NGB-FR-101
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