STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002005185_00208Unannotated protein. (272 aa)    
Predicted Functional Partners:
GCA_002005185_00347
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.927
GCA_002005185_00643
Unannotated protein.
     
 0.905
GCA_002005185_01139
Unannotated protein; Belongs to the LDH/MDH superfamily.
   
 
 0.904
GCA_002005185_00842
Unannotated protein.
 
 
 0.871
CYK26_03025
Unannotated protein; Belongs to the thioredoxin family.
  
 
 0.855
cysK
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.835
GCA_002005185_00725
Unannotated protein.
  
 
 0.835
D3219_03030
Unannotated protein.
       0.752
GCA_002005185_00422
Unannotated protein.
 
      0.509
GCA_002005185_00206
Unannotated protein.
  
    0.489
Your Current Organism:
Veillonella parvula
NCBI taxonomy Id: 29466
Other names: ATCC 10790, ATCC 17745 [[Veillonella alcalescens]], CCUG 5123, DSM 2008, JCM 12972, Micrococcus gazogenes, Micrococcus gazogenes alcalescens anaerobius, Micrococcus lactilyticus, NCTC 11810, Staphylococcus parvulus, V. parvula, Veillonella alcalescens, Veillonella gazogenes
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.