STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002005185_00929Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_002005185_00568
Unannotated protein.
  
 
0.949
GCA_002005185_01269
Unannotated protein.
  
 
 0.932
GCA_002005185_01747
Unannotated protein.
     
 0.930
GCA_002005185_00842
Unannotated protein.
   
 
 0.920
metK
Unannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.919
GCA_002005185_00845
Unannotated protein.
     
 0.912
ahcY
Unannotated protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.900
CYK26_01555
Unannotated protein.
   
 
 0.821
cysK
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.810
GCA_002005185_00725
Unannotated protein.
     
 0.810
Your Current Organism:
Veillonella parvula
NCBI taxonomy Id: 29466
Other names: ATCC 10790, ATCC 17745 [[Veillonella alcalescens]], CCUG 5123, DSM 2008, JCM 12972, Micrococcus gazogenes, Micrococcus gazogenes alcalescens anaerobius, Micrococcus lactilyticus, NCTC 11810, Staphylococcus parvulus, V. parvula, Veillonella alcalescens, Veillonella gazogenes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.