STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folBUnannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (120 aa)    
Predicted Functional Partners:
GCA_002005185_01137
Unannotated protein.
 
 0.999
GCA_002005185_01135
Unannotated protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
 
 
 0.998
folE
Unannotated protein.
 
  
 0.941
GCA_002005185_01133
Unannotated protein.
  
    0.769
folE-2
Unannotated protein.
 
  
 0.719
GCA_002005185_01902
Unannotated protein; Belongs to the folylpolyglutamate synthase family.
  
  
 0.525
GCA_002005185_01138
Unannotated protein.
       0.523
GCA_002005185_01132
Unannotated protein; Belongs to the peptidase M20A family.
       0.509
ftsH
Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
    0.506
ribD
Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.469
Your Current Organism:
Veillonella parvula
NCBI taxonomy Id: 29466
Other names: ATCC 10790, ATCC 17745 [[Veillonella alcalescens]], CCUG 5123, DSM 2008, JCM 12972, Micrococcus gazogenes, Micrococcus gazogenes alcalescens anaerobius, Micrococcus lactilyticus, NCTC 11810, Staphylococcus parvulus, V. parvula, Veillonella alcalescens, Veillonella gazogenes
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