STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLM1_0035Tungsten formylmethanofuran dehydrogenase subunit H FwdH. (155 aa)    
Predicted Functional Partners:
YLM1_0036
Tungsten formylmethanofuran dehydrogenase subunit F FwdF.
 
 
 0.997
YLM1_0037
Tungsten formylmethanofuran dehydrogenase subunit G FwdG.
 
 
 0.997
YLM1_0038
Tungsten formylmethanofuran dehydrogenase subunit D FwdD.
  
 
 0.994
YLM1_0040
Tungsten formylmethanofuran dehydrogenase subunit A FwdA.
  
 
 0.985
YLM1_0039
Tungsten formylmethanofuran dehydrogenase subunit B FwdB.
  
 
  0.983
YLM1_0041
Tungsten formylmethanofuran dehydrogenase subunit C FwdC.
  
 
  0.981
YLM1_0421
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.975
YLM1_0219
Pyruvate ferredoxin oxidoreductase-associated PorF.
 
  
 0.924
YLM1_0218
Pyruvate ferredoxin oxidoreductase-associated PorE.
    
 0.912
YLM1_0892
Formylmethanofuran-tetrahydromethanopterin formyltransferase Ftr.
     
 0.909
Your Current Organism:
Methanobrevibacter olleyae
NCBI taxonomy Id: 294671
Other names: DSM 16632, M. olleyae, Methanobrevibacter olleyae Rea et al. 2007, Methanobrevibacter sp. KM1H5-1P, OCM 841, strain KM1H5-1P
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