STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLM1_0878Phosphosulfolactate synthase ComA. (257 aa)    
Predicted Functional Partners:
YLM1_1399
2-phosphosulfolactate phosphatase ComB.
 
 
 0.990
YLM1_0032
Molybdopterin-guanine dinucleotide biosynthesis protein B MobB.
  
    0.844
YLM1_1122
Hydrogenase accessory protein HypB.
  
    0.842
YLM1_0727
Restriction endonuclease.
   
    0.799
YLM1_0881
Sulfopyruvate decarboxylase alpha subunit ComD.
  
  
 0.796
YLM1_0882
Sulfopyruvate decarboxylase beta subunit ComE.
  
  
 0.760
YLM1_0877
Methanogeneis marker protein 16.
       0.649
YLM1_1417
L-sulfolactate dehydrogenase ComC.
 
   
 0.614
YLM1_0760
TrmB family transcriptional regulator.
   
    0.537
YLM1_1692
Transcriptional regulator.
   
    0.537
Your Current Organism:
Methanobrevibacter olleyae
NCBI taxonomy Id: 294671
Other names: DSM 16632, M. olleyae, Methanobrevibacter olleyae Rea et al. 2007, Methanobrevibacter sp. KM1H5-1P, OCM 841, strain KM1H5-1P
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.