STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLM1_12882-oxoglutarate ferredoxin oxidoreductase subunit delta KorD. (68 aa)    
Predicted Functional Partners:
YLM1_1285
2-oxoglutarate ferredoxin oxidoreductase subunit gamma KorC.
 
 
 0.996
YLM1_1287
2-oxoglutarate ferredoxin oxidoreductase subunit alpha KorA.
 
 
 0.994
YLM1_1286
2-oxoglutarate ferredoxin oxidoreductase subunit beta KorB.
  
 
 0.992
sucC
succinate-CoA synthetase beta subunit SucC; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
    
  0.959
sucD
succinate-CoA ligase alpha subunit SucD; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.925
YLM1_0141
Glutathione-disulfide reductase Gor.
    
 0.904
YLM1_1577
Succinate dehydrogenase/fumarate reductase flavoprotein subunit SdhA.
  
 
 0.875
YLM1_0414
Aminotransferase.
 
  
 0.835
YLM1_1129
acetyl-CoA acetyltransferase.
    
 0.830
YLM1_1215
Glutamate dehydrogenase GdhA; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.814
Your Current Organism:
Methanobrevibacter olleyae
NCBI taxonomy Id: 294671
Other names: DSM 16632, M. olleyae, Methanobrevibacter olleyae Rea et al. 2007, Methanobrevibacter sp. KM1H5-1P, OCM 841, strain KM1H5-1P
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