STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB59245.1Peptidase propeptide and YPEB domain protein. (748 aa)    
Predicted Functional Partners:
ANB60095.1
ppx/GppA phosphatase family protein; [FP] COG0248 Exopolyphosphatase.
  
  
 0.714
GFC30_646
Conserved hypothetical protein; [S] COG1655 Uncharacterized protein conserved in bacteria.
  
     0.509
ANB61416.1
Hypothetical protein.
       0.495
ANB61332.1
Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.
     
 0.452
GFC30_471
Conserved hypothetical protein; [G] COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
  
     0.449
pyk
Pyruv_kin: pyruvate kinase; [G] COG0469 Pyruvate kinase.
     
 0.434
ANB61695.1
2A0309: spore germination family protein.
  
     0.425
ANB61245.1
Sensory box protein; [T] COG0642 Signal transduction histidine kinase.
     
 0.405
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.401
Your Current Organism:
Anoxybacillus amylolyticus
NCBI taxonomy Id: 294699
Other names: A. amylolyticus, ATCC BAA-872, Anoxybacillus amylolyticus Poli et al. 2006, CIP 108338, DSM 15939, strain MR3C
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