STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIADspore_III_AD: stage III sporulation protein AD. (134 aa)    
Predicted Functional Partners:
spoIIIAE
spore_III_AE: stage III sporulation protein AE.
 
  
 0.990
spoIIIAF
spore_III_AF: stage III sporulation protein AF.
 
  
 0.989
spoIIIAC
spore_III_AC: stage III sporulation protein AC.
 
  
 0.982
spoIIIAB
spore_III_AB: stage III sporulation protein AB.
 
  
 0.974
spoIIIAG
spore_III_AG: stage III sporulation protein AG.
 
  
 0.967
spoIIIAA
spore_III_AA: stage III sporulation protein AA; [S] COG3854 Uncharacterized protein conserved in bacteria.
 
  
 0.966
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
    0.845
ANB59736.1
Hypothetical protein.
 
    0.835
spoIIIAH
Stage III sporulation protein AH.
  
  
 0.834
yqfC
spore_yqfC: sporulation protein YqfC.
  
  
 0.807
Your Current Organism:
Anoxybacillus amylolyticus
NCBI taxonomy Id: 294699
Other names: A. amylolyticus, ATCC BAA-872, Anoxybacillus amylolyticus Poli et al. 2006, CIP 108338, DSM 15939, strain MR3C
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