STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFC30_504BH1478 protein; [S] COG1728 Uncharacterized protein conserved in bacteria. (145 aa)    
Predicted Functional Partners:
GFC30_502
Hypothetical protein.
 
     0.918
GFC30_505
Hypothetical protein.
 
     0.896
GFC30_507
flgN family protein.
 
     0.837
GFC30_503
Conserved hypothetical protein; [S] COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB.
       0.767
degS
Sensor protein degS; [T] COG4585 Signal transduction histidine kinase.
 
     0.700
ANB61615.1
Flagellar hook-length control FliK family protein.
  
 
   0.656
GFC30_526
Conserved hypothetical protein; [N] COG1334 Uncharacterized flagellar protein FlaG.
 
     0.654
GFC30_646
Conserved hypothetical protein; [S] COG1655 Uncharacterized protein conserved in bacteria.
 
     0.648
fliW
Flagellar assembly factor FliW; [S] COG1699 Uncharacterized protein conserved in bacteria.
 
     0.643
fliS
fliS: flagellar protein FliS; [NUO] COG1516 Flagellin-specific chaperone FliS.
 
 
 0.640
Your Current Organism:
Anoxybacillus amylolyticus
NCBI taxonomy Id: 294699
Other names: A. amylolyticus, ATCC BAA-872, Anoxybacillus amylolyticus Poli et al. 2006, CIP 108338, DSM 15939, strain MR3C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.