Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFC30_7Transglutaminase-like superfamily protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (713 aa)    
Predicted Functional Partners:
GFC30_8
Conserved hypothetical protein; [R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.980
GFC30_9
AAA domain family protein; [R] COG0714 MoxR-like ATPases.
 
  
 0.976
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.733
GFC30_434
Sortase_fam: sortase family protein; [M] COG3764 Sortase (surface protein transpeptidase).
 
     0.441
sigX
[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
     0.429
ANB61630.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Anoxybacillus amylolyticus
NCBI taxonomy Id: 294699
Other names: A. amylolyticus, ATCC BAA-872, Anoxybacillus amylolyticus Poli et al. 2006, CIP 108338, DSM 15939, strain MR3C
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